Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC25 | PKD1 | ENSMICP00000049969 | ENSMICP00000037453 | Coiled-coil domain containing 25. | Polycystin 1, transient receptor potential channel interacting. | 0.705 |
CCDC25 | PKD1L3 | ENSMICP00000049969 | ENSMICP00000010347 | Coiled-coil domain containing 25. | Polycystin 1 like 3, transient receptor potential channel interacting. | 0.705 |
CCDC25 | PKD2L1 | ENSMICP00000049969 | ENSMICP00000014004 | Coiled-coil domain containing 25. | Polycystin 2 like 1, transient receptor potential cation channel. | 0.705 |
CCDC25 | PKDREJ | ENSMICP00000049969 | ENSMICP00000000896 | Coiled-coil domain containing 25. | Polycystin family receptor for egg jelly. | 0.705 |
ENSMICP00000010905 | PKD1L3 | ENSMICP00000010905 | ENSMICP00000010347 | annotation not available | Polycystin 1 like 3, transient receptor potential channel interacting. | 0.751 |
ENSMICP00000010905 | PKD2L1 | ENSMICP00000010905 | ENSMICP00000014004 | annotation not available | Polycystin 2 like 1, transient receptor potential cation channel. | 0.990 |
EXOC4 | EXOC5 | ENSMICP00000040554 | ENSMICP00000030270 | Exocyst complex component 4. | Exocyst complex component 5. | 0.999 |
EXOC4 | PKD1 | ENSMICP00000040554 | ENSMICP00000037453 | Exocyst complex component 4. | Polycystin 1, transient receptor potential channel interacting. | 0.680 |
EXOC4 | PKD1L3 | ENSMICP00000040554 | ENSMICP00000010347 | Exocyst complex component 4. | Polycystin 1 like 3, transient receptor potential channel interacting. | 0.514 |
EXOC4 | PKD2L1 | ENSMICP00000040554 | ENSMICP00000014004 | Exocyst complex component 4. | Polycystin 2 like 1, transient receptor potential cation channel. | 0.674 |
EXOC4 | PKDREJ | ENSMICP00000040554 | ENSMICP00000000896 | Exocyst complex component 4. | Polycystin family receptor for egg jelly. | 0.651 |
EXOC5 | EXOC4 | ENSMICP00000030270 | ENSMICP00000040554 | Exocyst complex component 5. | Exocyst complex component 4. | 0.999 |
EXOC5 | PKD1 | ENSMICP00000030270 | ENSMICP00000037453 | Exocyst complex component 5. | Polycystin 1, transient receptor potential channel interacting. | 0.722 |
EXOC5 | PKD1L3 | ENSMICP00000030270 | ENSMICP00000010347 | Exocyst complex component 5. | Polycystin 1 like 3, transient receptor potential channel interacting. | 0.594 |
EXOC5 | PKD2L1 | ENSMICP00000030270 | ENSMICP00000014004 | Exocyst complex component 5. | Polycystin 2 like 1, transient receptor potential cation channel. | 0.794 |
EXOC5 | PKDREJ | ENSMICP00000030270 | ENSMICP00000000896 | Exocyst complex component 5. | Polycystin family receptor for egg jelly. | 0.696 |
EXOC5 | RHO | ENSMICP00000030270 | ENSMICP00000047201 | Exocyst complex component 5. | Rhodopsin. | 0.689 |
PKD1 | CCDC25 | ENSMICP00000037453 | ENSMICP00000049969 | Polycystin 1, transient receptor potential channel interacting. | Coiled-coil domain containing 25. | 0.705 |
PKD1 | EXOC4 | ENSMICP00000037453 | ENSMICP00000040554 | Polycystin 1, transient receptor potential channel interacting. | Exocyst complex component 4. | 0.680 |
PKD1 | EXOC5 | ENSMICP00000037453 | ENSMICP00000030270 | Polycystin 1, transient receptor potential channel interacting. | Exocyst complex component 5. | 0.722 |
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