STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF144BRing finger protein 144B. (303 aa)    
Predicted Functional Partners:
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.808
ENSMICP00000027681
annotation not available
    
 0.787
RPS27A
annotation not available
    
 0.787
ENSMICP00000051028
annotation not available
    
 0.787
ENSMICP00000006531
annotation not available
    
 0.785
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.755
RNF216
Ring finger protein 216.
    
 0.747
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.736
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.731
ENSMICP00000050267
annotation not available
    
  0.731
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.