STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1069 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.983
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.970
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.966
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.964
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.952
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.947
CHRAC1
Chromatin accessibility complex subunit 1.
    
 
 0.942
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
    
 0.929
H2AZ1
H2A.Z variant histone 1.
   
 0.926
H2AZ2
H2A.Z variant histone 2.
   
 0.926
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.