STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMBRA1Autophagy and beclin 1 regulator 1. (1299 aa)    
Predicted Functional Partners:
BECN1
Beclin 1.
    
 0.986
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.950
TRAF6
TNF receptor associated factor 6.
    
 0.947
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 0.943
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.939
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
   
 
 0.939
ATG14
Autophagy related 14.
     
 0.938
DDB1
Damage specific DNA binding protein 1.
    
 0.938
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.937
NRBF2
Nuclear receptor binding factor 2.
     
 0.922
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.