STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC2LC-type lectin domain family 2 member L. (214 aa)    
Predicted Functional Partners:
S100A1
S100 calcium binding protein A1.
   
   0.554
CHTOP
Chromatin target of PRMT1.
   
   0.554
HAP1
Huntingtin associated protein 1.
      
 0.517
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
   0.513
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
   0.492
LRRC40
Leucine rich repeat containing 40.
      
 0.479
ENSMICP00000024090
annotation not available
   
   0.464
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
   0.464
MAGOHB
Mago homolog B, exon junction complex subunit.
   
   0.460
ENSMICP00000027237
annotation not available
   
   0.460
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.