STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18orf54Chromosome 18 open reading frame 54. (517 aa)    
Predicted Functional Partners:
C3orf14
Chromosome 3 open reading frame 14.
      
 0.571
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.568
CCDC77
Coiled-coil domain containing 77.
      
 0.568
ZNF367
Zinc finger protein 367.
      
 0.559
CCDC150
Coiled-coil domain containing 150.
      
 0.474
CARNMT1
Carnosine N-methyltransferase 1.
      
 0.468
C9orf40
Chromosome 9 open reading frame 40.
      
 0.468
ENSMICP00000013079
annotation not available
      
 0.444
ENSMICP00000017096
annotation not available
      
 0.444
RIBC1
RIB43A domain with coiled-coils 1.
      
 0.434
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.