STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBRApolipoprotein B receptor. (1011 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
     
 0.774
NCOA7
Nuclear receptor coactivator 7.
      
 0.554
TUFM
Tu translation elongation factor, mitochondrial.
      
 0.476
CHRM4
Cholinergic receptor muscarinic 4.
      
 0.446
ANKRD42
Ankyrin repeat domain 42.
      
 0.439
SGTB
Small glutamine rich tetratricopeptide repeat containing beta.
      
 0.439
SH3RF3
SH3 domain containing ring finger 3.
   
  
 0.434
DUOXA2
Dual oxidase maturation factor 2.
      
 0.434
MYO1F
Myosin IF.
   
  
 0.403
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.