STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZK1PDZ domain containing 1. (518 aa)    
Predicted Functional Partners:
AKAP10
A-kinase anchoring protein 10.
    
 
 0.938
PRKAR2A
Protein kinase cAMP-dependent type II regulatory subunit alpha.
    
   0.912
CFTR
Cystic fibrosis transmembrane conductance regulator.
   
 0.814
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.802
PDZK1IP1
PDZK1 interacting protein 1.
    
 
 0.774
IFT57
Intraflagellar transport 57.
    
 0.763
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.755
IFT172
Intraflagellar transport 172.
    
 0.752
IFT80
annotation not available
    
 0.751
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.750
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.