STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN8Tetraspanin 8. (238 aa)    
Predicted Functional Partners:
MET
Hepatocyte growth factor receptor.
    
 0.739
MST1R
Macrophage stimulating 1 receptor.
    
 0.728
ITGA4
Integrin subunit alpha 4.
    
 0.705
CD19
CD19 molecule.
    
 0.619
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.607
ITGA9
Integrin subunit alpha 9.
    
 0.600
CLDN7
Claudin 7.
   
  
 0.590
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.590
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.546
USH1C
USH1 protein network component harmonin.
   
 0.540
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.