STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM12BRNA binding motif protein 12B. (846 aa)    
Predicted Functional Partners:
ASB12
Ankyrin repeat and SOCS box containing 12.
      
 0.570
TBC1D22A
TBC1 domain family member 22A.
      
 0.528
USP32
annotation not available
    
 
 0.487
TRABD
TraB domain containing.
      
 0.478
RAD23B
annotation not available
    
 0.471
ENSMICP00000026317
annotation not available
    
 0.471
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.471
ENSMICP00000032528
annotation not available
    
 0.471
PPEF1
Protein phosphatase with EF-hand domain 1.
      
 0.434
PPEF2
Protein phosphatase with EF-hand domain 2.
      
 0.434
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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