STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAF11SR-related CTD associated factor 11. (1460 aa)    
Predicted Functional Partners:
NIPBL
NIPBL cohesin loading factor.
   
  
 0.882
THOC2
THO complex 2.
   
    0.880
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 
 0.868
ATRX
ATRX chromatin remodeler.
   
   0.806
BCLAF1
BCL2 associated transcription factor 1.
  
    0.789
PDS5A
PDS5 cohesin associated factor A.
   
  
 0.768
STAG2
Stromal antigen 2.
   
  
 0.766
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
   
    0.765
PHIP
Pleckstrin homology domain interacting protein.
   
    0.764
SMC5
Structural maintenance of chromosomes 5.
   
    0.764
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.