STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF28Rho guanine nucleotide exchange factor 28. (1730 aa)    
Predicted Functional Partners:
LOC105881031
Transforming protein RhoA-like.
   
 0.932
RHOC
annotation not available
   
 0.932
ENSMICP00000027199
annotation not available
   
 0.932
ENSMICP00000037994
annotation not available
   
 0.932
ENSMICP00000046504
annotation not available
   
 0.932
RHOB
Ras homolog family member B.
   
 0.923
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
0.871
ARHGEF1
Rho guanine nucleotide exchange factor 1.
    
0.867
RAC3
Rac family small GTPase 3.
   
 0.846
RAC2
Rac family small GTPase 2.
   
 0.846
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.