STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMIETransmembrane inner ear. (153 aa)    
Predicted Functional Partners:
LHFPL5
LHFPL tetraspan subfamily member 5.
     
 0.834
CIB2
Calcium and integrin binding family member 2.
     
 0.828
CIB3
Calcium and integrin binding family member 3.
     
 0.677
TMC2
Transmembrane channel like 2.
     
 0.658
LHFPL3
LHFPL tetraspan subfamily member 3.
     
 0.629
LHFPL4
LHFPL tetraspan subfamily member 4.
     
 0.629
LOC105874783
annotation not available
     
 0.578
ENSMICP00000033726
annotation not available
     
 0.578
TMC3
Transmembrane channel like 3.
     
 0.539
PCDH15
Protocadherin related 15.
   
  
 0.481
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.