Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKRD31 | PNKP | ENSMICP00000034323 | ENSMICP00000025775 | Ankyrin repeat domain 31. | Polynucleotide kinase 3'-phosphatase. | 0.875 |
FCSK | GMDS | ENSMICP00000001223 | ENSMICP00000048881 | Fucose kinase. | GDP-mannose 4,6-dehydratase. | 0.663 |
FCSK | PNKP | ENSMICP00000001223 | ENSMICP00000025775 | Fucose kinase. | Polynucleotide kinase 3'-phosphatase. | 0.978 |
GMDS | FCSK | ENSMICP00000048881 | ENSMICP00000001223 | GDP-mannose 4,6-dehydratase. | Fucose kinase. | 0.663 |
GMDS | PNKP | ENSMICP00000048881 | ENSMICP00000025775 | GDP-mannose 4,6-dehydratase. | Polynucleotide kinase 3'-phosphatase. | 0.905 |
LIG1 | LIG3 | ENSMICP00000047763 | ENSMICP00000021554 | DNA ligase 1. | DNA ligase 3. | 0.799 |
LIG1 | PNKP | ENSMICP00000047763 | ENSMICP00000025775 | DNA ligase 1. | Polynucleotide kinase 3'-phosphatase. | 0.859 |
LIG1 | POLB | ENSMICP00000047763 | ENSMICP00000048793 | DNA ligase 1. | DNA polymerase beta. | 0.931 |
LIG1 | POLL | ENSMICP00000047763 | ENSMICP00000041078 | DNA ligase 1. | DNA polymerase lambda. | 0.895 |
LIG1 | XRCC1 | ENSMICP00000047763 | ENSMICP00000028307 | DNA ligase 1. | X-ray repair cross complementing 1. | 0.985 |
LIG3 | LIG1 | ENSMICP00000021554 | ENSMICP00000047763 | DNA ligase 3. | DNA ligase 1. | 0.799 |
LIG3 | PNKP | ENSMICP00000021554 | ENSMICP00000025775 | DNA ligase 3. | Polynucleotide kinase 3'-phosphatase. | 0.965 |
LIG3 | POLB | ENSMICP00000021554 | ENSMICP00000048793 | DNA ligase 3. | DNA polymerase beta. | 0.944 |
LIG3 | POLL | ENSMICP00000021554 | ENSMICP00000041078 | DNA ligase 3. | DNA polymerase lambda. | 0.880 |
LIG3 | XRCC1 | ENSMICP00000021554 | ENSMICP00000028307 | DNA ligase 3. | X-ray repair cross complementing 1. | 0.999 |
PNKP | ANKRD31 | ENSMICP00000025775 | ENSMICP00000034323 | Polynucleotide kinase 3'-phosphatase. | Ankyrin repeat domain 31. | 0.875 |
PNKP | FCSK | ENSMICP00000025775 | ENSMICP00000001223 | Polynucleotide kinase 3'-phosphatase. | Fucose kinase. | 0.978 |
PNKP | GMDS | ENSMICP00000025775 | ENSMICP00000048881 | Polynucleotide kinase 3'-phosphatase. | GDP-mannose 4,6-dehydratase. | 0.905 |
PNKP | LIG1 | ENSMICP00000025775 | ENSMICP00000047763 | Polynucleotide kinase 3'-phosphatase. | DNA ligase 1. | 0.859 |
PNKP | LIG3 | ENSMICP00000025775 | ENSMICP00000021554 | Polynucleotide kinase 3'-phosphatase. | DNA ligase 3. | 0.965 |
page 1 of 2