STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF6annotation not available (588 aa)    
Predicted Functional Partners:
NUDT21
Nudix hydrolase 21.
   
 0.991
CPSF7
Cleavage and polyadenylation specific factor 7.
  
0.972
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.896
SRSF1
annotation not available
   
 0.874
SYMPK
Symplekin.
   
 0.846
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.844
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.829
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.820
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.820
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.812
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.