Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX18 | MRPL40 | ENSMICP00000033878 | ENSMICP00000042466 | Cytochrome c oxidase assembly factor COX18. | Mitochondrial ribosomal protein L40. | 0.663 |
COX18 | SEC22A | ENSMICP00000033878 | ENSMICP00000051542 | Cytochrome c oxidase assembly factor COX18. | SEC22 homolog A, vesicle trafficking protein. | 0.451 |
COX18 | TANGO2 | ENSMICP00000033878 | ENSMICP00000027498 | Cytochrome c oxidase assembly factor COX18. | Transport and golgi organization 2 homolog. | 0.476 |
COX18 | TOMM22 | ENSMICP00000033878 | ENSMICP00000028180 | Cytochrome c oxidase assembly factor COX18. | Translocase of outer mitochondrial membrane 22. | 0.599 |
COX18 | VPS37C | ENSMICP00000033878 | ENSMICP00000026742 | Cytochrome c oxidase assembly factor COX18. | VPS37C subunit of ESCRT-I. | 0.447 |
LIN37 | MCM3AP | ENSMICP00000009095 | ENSMICP00000019063 | Lin-37 DREAM MuvB core complex component. | Minichromosome maintenance complex component 3 associated protein. | 0.532 |
LIN37 | TANGO2 | ENSMICP00000009095 | ENSMICP00000027498 | Lin-37 DREAM MuvB core complex component. | Transport and golgi organization 2 homolog. | 0.457 |
MCM3AP | LIN37 | ENSMICP00000019063 | ENSMICP00000009095 | Minichromosome maintenance complex component 3 associated protein. | Lin-37 DREAM MuvB core complex component. | 0.532 |
MCM3AP | TANGO2 | ENSMICP00000019063 | ENSMICP00000027498 | Minichromosome maintenance complex component 3 associated protein. | Transport and golgi organization 2 homolog. | 0.476 |
MRPL40 | COX18 | ENSMICP00000042466 | ENSMICP00000033878 | Mitochondrial ribosomal protein L40. | Cytochrome c oxidase assembly factor COX18. | 0.663 |
MRPL40 | SLC25A1 | ENSMICP00000042466 | ENSMICP00000015568 | Mitochondrial ribosomal protein L40. | Solute carrier family 25 member 1. | 0.580 |
MRPL40 | TANGO2 | ENSMICP00000042466 | ENSMICP00000027498 | Mitochondrial ribosomal protein L40. | Transport and golgi organization 2 homolog. | 0.578 |
MRPL40 | TXNRD2 | ENSMICP00000042466 | ENSMICP00000043740 | Mitochondrial ribosomal protein L40. | Thioredoxin reductase 2. | 0.468 |
MRPL40 | UFD1 | ENSMICP00000042466 | ENSMICP00000028694 | Mitochondrial ribosomal protein L40. | Ubiquitin recognition factor in ER associated degradation 1. | 0.557 |
SEC22A | COX18 | ENSMICP00000051542 | ENSMICP00000033878 | SEC22 homolog A, vesicle trafficking protein. | Cytochrome c oxidase assembly factor COX18. | 0.451 |
SEC22A | TANGO2 | ENSMICP00000051542 | ENSMICP00000027498 | SEC22 homolog A, vesicle trafficking protein. | Transport and golgi organization 2 homolog. | 0.473 |
SEC22A | TOMM22 | ENSMICP00000051542 | ENSMICP00000028180 | SEC22 homolog A, vesicle trafficking protein. | Translocase of outer mitochondrial membrane 22. | 0.433 |
SEC22A | VPS37C | ENSMICP00000051542 | ENSMICP00000026742 | SEC22 homolog A, vesicle trafficking protein. | VPS37C subunit of ESCRT-I. | 0.443 |
SLC25A1 | MRPL40 | ENSMICP00000015568 | ENSMICP00000042466 | Solute carrier family 25 member 1. | Mitochondrial ribosomal protein L40. | 0.580 |
SLC25A1 | TANGO2 | ENSMICP00000015568 | ENSMICP00000027498 | Solute carrier family 25 member 1. | Transport and golgi organization 2 homolog. | 0.571 |
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