STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC43Coiled-coil domain containing 43. (248 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
    0.501
WASHC3
WASH complex subunit 3.
      
 0.478
FOXK1
Forkhead box K1.
      
 0.478
GOSR2
annotation not available
      
 0.477
PNKP
Polynucleotide kinase 3'-phosphatase.
    
   0.459
ZFP28
ZFP28 zinc finger protein.
      
 0.445
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
      
 0.434
CCDC34
Coiled-coil domain containing 34.
      
 0.433
WASHC5
WASH complex subunit 5.
      
 0.430
GTF2F2
General transcription factor IIF subunit 2.
   
    0.422
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.