STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB5CRAB5C, member RAS oncogene family. (216 aa)    
Predicted Functional Partners:
RABGEF1
annotation not available
   
 0.983
ENSMICP00000028230
annotation not available
   
 0.983
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.976
EEA1
Early endosome antigen 1.
    
 0.967
ENSMICP00000046321
annotation not available
   
 0.965
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.955
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
   
 
 0.955
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.944
RIN1
Ras and Rab interactor 1.
    
 0.908
GDI1
GDP dissociation inhibitor 1.
   
 0.891
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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