STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMF1TATA element modulatory factor 1. (1022 aa)    
Predicted Functional Partners:
RAB6A
RAB6A, member RAS oncogene family.
    
 0.824
RAB6B
RAB6B, member RAS oncogene family.
    
 0.824
GCC1
GRIP and coiled-coil domain containing 1.
     
 0.812
RAB36
RAB36, member RAS oncogene family.
    
 0.795
RAB34
RAB34, member RAS oncogene family.
    
 0.795
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.792
RANBP2
RAN binding protein 2.
   
 0.781
VPS52
VPS52 subunit of GARP complex.
     
 0.781
VPS54
VPS54 subunit of GARP complex.
   
 
 0.773
ENSMICP00000008786
annotation not available
     
 0.771
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.