STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRABDTraB domain containing. (376 aa)    
Predicted Functional Partners:
SURF1
SURF1 cytochrome c oxidase assembly factor.
    
   0.753
CISD3
CDGSH iron sulfur domain 3.
    
   0.753
CLCC1
Chloride channel CLIC like 1.
    
   0.753
SEC61A1
SEC61 translocon alpha 1 subunit.
    
   0.718
SEC61A2
annotation not available
    
   0.718
ENSMICP00000033452
annotation not available
    
   0.718
WNK4
WNK lysine deficient protein kinase 4.
    
   0.623
CNTD1
Cyclin N-terminal domain containing 1.
    
   0.623
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
    
   0.623
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
    
   0.623
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.