STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX40DEAH-box helicase 40. (779 aa)    
Predicted Functional Partners:
UTP14A
UTP14A small subunit processome component.
   
 0.941
SLU7
SLU7 homolog, splicing factor.
   
 0.937
ITSN2
Intersectin 2.
    
  0.936
DDX49
DEAD-box helicase 49.
  
 0.935
NOP14
NOP14 nucleolar protein.
 
 
 0.933
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.932
UTP25
UTP25 small subunit processor component.
   
 0.931
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.930
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.926
PRPF18
annotation not available
   
 0.923
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.