STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPALPP1GPALPP motifs containing 1. (337 aa)    
Predicted Functional Partners:
WDR6
WD repeat domain 6.
      
 0.573
PTDSS1
Phosphatidylserine synthase 1.
      
 0.567
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.556
LRRC2
Leucine rich repeat containing 2.
   
  
 0.542
CCDC82
Coiled-coil domain containing 82.
      
 0.540
TBL2
Transducin beta like 2.
      
 0.478
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.465
ARL6IP4
annotation not available
    
   0.455
PTPN1
Protein tyrosine phosphatase non-receptor type 1.
      
 0.453
LRRC39
Leucine rich repeat containing 39.
   
  
 0.438
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.