STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD3-TMEFF1MSANTD3-TMEFF1 readthrough. (454 aa)    
Predicted Functional Partners:
ZDHHC5
Zinc finger DHHC-type containing 5.
    
   0.742
GDF1
annotation not available
    
 0.673
TGFA
Transforming growth factor alpha.
     
0.648
GDF3
Growth differentiation factor 3.
    
 0.561
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.524
TGFB2
Transforming growth factor beta 2.
    
 0.510
LOC105863732
annotation not available
    
 0.492
ZDHHC8
Zinc finger DHHC-type containing 8.
    
   0.489
TDGF1
Teratocarcinoma-derived growth factor 1.
      
 0.487
BMP6
Bone morphogenetic protein 6.
    
 0.484
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.