STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPCHeterogeneous nuclear ribonucleoprotein C. (322 aa)    
Predicted Functional Partners:
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.944
RALY
RALY heterogeneous nuclear ribonucleoprotein.
  
0.936
CELF1
CUGBP Elav-like family member 1.
   
 
 0.931
PCBP1
poly(rC) binding protein 1.
   
 0.905
HNRNPM
annotation not available
   
 0.904
ENSMICP00000029082
annotation not available
   
 0.904
TRA2B
Transformer 2 beta homolog.
   
 0.889
SRSF1
annotation not available
   
 0.879
RALYL
RALY RNA binding protein like.
   
0.847
DHX9
DExH-box helicase 9.
   
 0.846
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.