STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOMEZHomeobox and leucine zipper encoding. (549 aa)    
Predicted Functional Partners:
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.763
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.635
ARID4A
AT-rich interaction domain 4A.
    
 0.634
ARID4B
AT-rich interaction domain 4B.
    
 0.634
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.629
MET
Hepatocyte growth factor receptor.
    
 0.597
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.597
MST1R
Macrophage stimulating 1 receptor.
    
 0.597
FREM1
FRAS1 related extracellular matrix 1.
    
 0.596
FREM3
FRAS1 related extracellular matrix 3.
    
 0.596
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.