STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1LLimb development membrane protein 1 like. (489 aa)    
Predicted Functional Partners:
SHH
Sonic hedgehog signaling molecule.
 
   
 0.795
LRP2
LDL receptor related protein 2.
    
 0.784
PTCH2
Patched 2.
     
 0.769
PTCH1
Patched 1.
     
 0.766
IHH
Indian hedgehog signaling molecule.
 
   
 0.692
LCN1
Lipocalin 1.
    
 
 0.651
LRP4
LDL receptor related protein 4.
    
  0.589
SH2D3C
SH2 domain containing 3C.
      
 0.568
DHH
Desert hedgehog signaling molecule.
 
   
 0.565
FKBP10
FKBP prolyl isomerase 10.
    
 
 0.549
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.