STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM47RNA binding motif protein 47. (580 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.875
APOBEC1
Apolipoprotein B mRNA editing enzyme catalytic subunit 1.
    
 0.805
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
     
 0.797
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.689
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.689
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.685
SRSF1
annotation not available
   
 0.667
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 
 0.647
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.640
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.637
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.