STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX1T-box transcription factor 1. (480 aa)    
Predicted Functional Partners:
CFAP54
Cilia and flagella associated protein 54.
   
  
 0.804
RCHY1
Ring finger and CHY zinc finger domain containing 1.
   
    0.792
HMX3
H6 family homeobox 3.
    
 
 0.744
NKX2-5
NK2 homeobox 5.
    
 
 0.640
GNB1L
G protein subunit beta 1 like.
      
 0.561
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.542
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.542
ISL1
ISL LIM homeobox 1.
    
 
 0.509
ISL2
ISL LIM homeobox 2.
    
 
 0.509
ALX3
ALX homeobox 3.
    
 
 0.476
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.