STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH7Protocadherin 7. (1085 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
    
 0.718
MYO9B
Myosin IXB.
    
 0.673
LHFPL2
LHFPL tetraspan subfamily member 2.
    
  0.655
ITGB3
annotation not available
    
 0.638
CIT
Citron rho-interacting serine/threonine kinase.
    
  0.628
ROCK2
Rho associated coiled-coil containing protein kinase 2.
    
 0.625
APLP2
Amyloid beta precursor like protein 2.
    
  0.623
ENSMICP00000002651
annotation not available
    
 0.620
ROCK1
Rho associated coiled-coil containing protein kinase 1.
    
 0.616
IQGAP3
IQ motif containing GTPase activating protein 3.
    
 0.614
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.