STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT4Zinc finger matrin-type 4. (195 aa)    
Predicted Functional Partners:
DENND5B
DENN domain containing 5B.
      
 0.678
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.629
TM2D2
TM2 domain containing 2.
      
 0.556
SLC24A3
Solute carrier family 24 member 3.
      
 0.536
PPL
Periplakin.
      
 0.529
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
   
 
 0.523
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
   
 
 0.521
EVPL
Envoplakin.
      
 0.511
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.499
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.478
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.