STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC9Coiled-coil domain containing 9. (592 aa)    
Predicted Functional Partners:
WDR18
WD repeat domain 18.
   
 0.687
TEX10
Testis expressed 10.
    
 0.645
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.625
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 0.613
RHBDL3
Rhomboid like 3.
    
 0.606
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
   
  0.596
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
  0.596
ZNF593
Zinc finger protein 593.
   
 
 0.590
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
  0.576
ENSMICP00000045573
annotation not available
   
  0.576
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.