STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRATD2LRAT domain containing 2. (310 aa)    
Predicted Functional Partners:
UROD
Uroporphyrinogen decarboxylase.
    
   0.705
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.572
DOP1B
DOP1 leucine zipper like protein B.
      
 0.553
CLBA1
Clathrin binding box of aftiphilin containing 1.
      
 0.544
WDR81
WD repeat domain 81.
      
 0.478
ECPAS
Ecm29 proteasome adaptor and scaffold.
      
 0.476
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
      
 0.475
ENDOV
Endonuclease V.
    
   0.457
TICRR
TOPBP1 interacting checkpoint and replication regulator.
      
 0.453
DOP1A
DOP1 leucine zipper like protein A.
      
 0.449
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.