STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105871709annotation not available (563 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
 0.797
UTP20
UTP20 small subunit processome component.
   
 0.733
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.726
WDR43
WD repeat domain 43.
   
 0.707
EMG1
EMG1 N1-specific pseudouridine methyltransferase.
   
  0.687
RPS7
Ribosomal protein S7.
    
 0.686
UTP11
UTP11 small subunit processome component.
    
  0.684
NOC4L
Nucleolar complex associated 4 homolog.
    
 0.684
KRR1
KRR1 small subunit processome component homolog.
    
  0.684
DCAF13
DDB1 and CUL4 associated factor 13.
    
  0.684
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.