STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNT1tRNA nucleotidyl transferase 1. (434 aa)    
Predicted Functional Partners:
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
 0.943
APMAP
Adipocyte plasma membrane associated protein.
  
 0.941
TTI1
TELO2 interacting protein 1.
    
 
 0.843
DIS3L
DIS3 like exosome 3'-5' exoribonuclease.
  
 0.780
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease.
  
 0.780
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
  
 0.780
HELZ2
Helicase with zinc finger 2.
  
 0.778
HLCS
Holocarboxylase synthetase.
  
  
 0.760
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.729
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.729
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.