STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHRF1PHD and ring finger domains 1. (1684 aa)    
Predicted Functional Partners:
SMG5
SMG5 nonsense mediated mRNA decay factor.
   
    0.766
DNMT1
DNA methyltransferase 1.
    
 
 0.576
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 
 0.540
APIP
APAF1 interacting protein.
      
 0.532
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 
 0.532
SCAF1
SR-related CTD associated factor 1.
   
 
0.527
GTF3C1
General transcription factor IIIC subunit 1.
   
  
 0.510
TAOK3
TAO kinase 3.
   
  
 0.508
SPPL3
Signal peptide peptidase like 3.
      
 0.478
PXK
PX domain containing serine/threonine kinase like.
      
 0.472
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.