STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMICP00000044820annotation not available (223 aa)    
Predicted Functional Partners:
YARS1
tyrosyl-tRNA synthetase 1.
     
 0.682
PPP6C
Protein phosphatase 6 catalytic subunit.
   
   0.592
YARS2
tyrosyl-tRNA synthetase 2.
     
 0.577
HDDC3
HD domain containing 3.
  
    0.533
ENSMICP00000016614
annotation not available
  
  
 0.464
MARS1
methionyl-tRNA synthetase 1.
   
 
 0.450
EARS2
glutamyl-tRNA synthetase 2, mitochondrial.
     
 0.439
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.439
DTD2
D-aminoacyl-tRNA deacylase 2.
      
 0.438
ATP6V1D
ATPase H+ transporting V1 subunit D.
      
 0.433
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.