STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105859508annotation not available (85 aa)    
Predicted Functional Partners:
CASC1
Cancer susceptibility 1.
   
    0.756
CCDC62
Coiled-coil domain containing 62.
      
 0.475
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.473
TSR3
TSR3 ribosome maturation factor.
      
 0.465
SPACA1
Sperm acrosome associated 1.
      
 0.463
SPATA16
Spermatogenesis associated 16.
      
 0.461
PICK1
Protein interacting with PRKCA 1.
      
 0.443
SYNDIG1
Synapse differentiation inducing 1.
      
 0.434
FBXL21P
annotation not available
      
 0.432
GOPC
Golgi associated PDZ and coiled-coil motif containing.
      
 0.428
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.