Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GNB3 | GNB5 | ENSMICP00000042692 | ENSMICP00000001096 | G protein subunit beta 3. | G protein subunit beta 5. | 0.747 |
GNB3 | RASD2 | ENSMICP00000042692 | ENSMICP00000046182 | G protein subunit beta 3. | RASD family member 2. | 0.849 |
GNB5 | GNB3 | ENSMICP00000001096 | ENSMICP00000042692 | G protein subunit beta 5. | G protein subunit beta 3. | 0.747 |
GNB5 | RASD2 | ENSMICP00000001096 | ENSMICP00000046182 | G protein subunit beta 5. | RASD family member 2. | 0.849 |
ITSN1 | ITSN2 | ENSMICP00000045813 | ENSMICP00000035139 | Intersectin 1. | Intersectin 2. | 0.974 |
ITSN1 | MET | ENSMICP00000045813 | ENSMICP00000000633 | Intersectin 1. | Hepatocyte growth factor receptor. | 0.565 |
ITSN1 | MST1R | ENSMICP00000045813 | ENSMICP00000026551 | Intersectin 1. | Macrophage stimulating 1 receptor. | 0.565 |
ITSN1 | RASD2 | ENSMICP00000045813 | ENSMICP00000046182 | Intersectin 1. | RASD family member 2. | 0.942 |
ITSN2 | ITSN1 | ENSMICP00000035139 | ENSMICP00000045813 | Intersectin 2. | Intersectin 1. | 0.974 |
ITSN2 | MET | ENSMICP00000035139 | ENSMICP00000000633 | Intersectin 2. | Hepatocyte growth factor receptor. | 0.825 |
ITSN2 | MST1R | ENSMICP00000035139 | ENSMICP00000026551 | Intersectin 2. | Macrophage stimulating 1 receptor. | 0.825 |
ITSN2 | RASD2 | ENSMICP00000035139 | ENSMICP00000046182 | Intersectin 2. | RASD family member 2. | 0.963 |
MET | ITSN1 | ENSMICP00000000633 | ENSMICP00000045813 | Hepatocyte growth factor receptor. | Intersectin 1. | 0.565 |
MET | ITSN2 | ENSMICP00000000633 | ENSMICP00000035139 | Hepatocyte growth factor receptor. | Intersectin 2. | 0.825 |
MET | MST1R | ENSMICP00000000633 | ENSMICP00000026551 | Hepatocyte growth factor receptor. | Macrophage stimulating 1 receptor. | 0.880 |
MET | NF1 | ENSMICP00000000633 | ENSMICP00000033098 | Hepatocyte growth factor receptor. | Neurofibromin 1. | 0.415 |
MET | RASD2 | ENSMICP00000000633 | ENSMICP00000046182 | Hepatocyte growth factor receptor. | RASD family member 2. | 0.848 |
MET | SHANK1 | ENSMICP00000000633 | ENSMICP00000028492 | Hepatocyte growth factor receptor. | SH3 and multiple ankyrin repeat domains 1. | 0.412 |
MET | SHANK3 | ENSMICP00000000633 | ENSMICP00000016445 | Hepatocyte growth factor receptor. | SH3 and multiple ankyrin repeat domains 3. | 0.412 |
MST1R | ITSN1 | ENSMICP00000026551 | ENSMICP00000045813 | Macrophage stimulating 1 receptor. | Intersectin 1. | 0.565 |
page 1 of 3