STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF2Sperm flagellar 2. (2167 aa)    
Predicted Functional Partners:
EFCAB6
EF-hand calcium binding domain 6.
   
   0.849
ENSMICP00000013230
annotation not available
    
  0.818
ENSMICP00000041567
annotation not available
    
  0.818
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.810
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.719
SPAG6
Sperm associated antigen 6.
   
 
 0.705
CFAP54
Cilia and flagella associated protein 54.
   
 
 0.674
CCDC40
Coiled-coil domain containing 40.
    
 0.666
LRRC40
Leucine rich repeat containing 40.
    
 
 0.642
CIB4
Calcium and integrin binding family member 4.
    
 0.635
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.