STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM49AFamily with sequence similarity 49 member A. (323 aa)    
Predicted Functional Partners:
VPS37D
VPS37D subunit of ESCRT-I.
      
 0.656
DDX1
DEAD-box helicase 1.
      
 0.572
MYCN
MYCN proto-oncogene, bHLH transcription factor.
      
 0.556
VPS37C
VPS37C subunit of ESCRT-I.
      
 0.553
MXD1
MAX dimerization protein 1.
      
 0.542
LRATD1
LRAT domain containing 1.
      
 0.533
CELA1
Chymotrypsin like elastase 1.
      
 0.504
ENSMICP00000039112
annotation not available
  
 
  
0.493
FAM49B
Family with sequence similarity 49 member B.
  
 
  
0.489
PIK3C2G
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma.
      
 0.477
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.