STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1. (404 aa)    
Predicted Functional Partners:
UBXN7
annotation not available
   
 0.985
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.910
PEX19
annotation not available
    
 0.884
UBXN1
UBX domain protein 1.
   
 0.881
YOD1
YOD1 deubiquitinase.
    
 0.861
PEX13
Peroxisomal biogenesis factor 13.
    
 0.858
PEX12
Peroxisomal biogenesis factor 12.
    
 0.856
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.852
PEX14
Peroxisomal biogenesis factor 14.
    
 0.843
FAAP100
FA core complex associated protein 100.
   
 0.842
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.