STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD4FYVE, RhoGEF and PH domain containing 4. (843 aa)    
Predicted Functional Partners:
PIGN
Phosphatidylinositol glycan anchor biosynthesis class N.
   
    0.818
CDC42
Cell division cycle 42.
    
 0.719
ENSMICP00000020321
annotation not available
    
 0.719
ENSMICP00000036602
annotation not available
    
 0.719
SH3TC2
SH3 domain and tetratricopeptide repeats 2.
      
 0.577
RAC3
Rac family small GTPase 3.
    
 0.551
RAC2
Rac family small GTPase 2.
    
 0.551
ITSN2
Intersectin 2.
     
0.551
RAC1
Rac family small GTPase 1.
    
 0.551
ARHGEF1
Rho guanine nucleotide exchange factor 1.
    
0.547
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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