STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD1RNA pseudouridine synthase domain containing 1. (307 aa)    
Predicted Functional Partners:
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.933
GTPBP3
GTP binding protein 3, mitochondrial.
  
 
 0.929
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.904
PUS7L
Pseudouridine synthase 7 like.
   
 
 0.903
MRPL17
Mitochondrial ribosomal protein L17.
   
   0.902
MRPL21
Mitochondrial ribosomal protein L21.
   
   0.902
GTPBP8
GTP binding protein 8 (putative).
   
 
 0.897
MTG1
Mitochondrial ribosome associated GTPase 1.
   
 
 0.881
MRPL13
Mitochondrial ribosomal protein L13.
  
   0.875
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.874
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.