STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNF8SNF8 subunit of ESCRT-II. (293 aa)    
Predicted Functional Partners:
VPS25
Vacuolar protein sorting 25 homolog.
   
 0.999
VPS36
Vacuolar protein sorting 36 homolog.
   
 0.999
CHMP6
Charged multivesicular body protein 6.
    
 0.995
C17orf75
Chromosome 17 open reading frame 75.
    
 0.986
VPS28
VPS28 subunit of ESCRT-I.
   
 0.960
CHMP4C
Charged multivesicular body protein 4C.
    
 0.953
ENSMICP00000027260
annotation not available
    
 0.953
CHMP4B
annotation not available
    
 0.953
ENSMICP00000001568
annotation not available
    
 0.952
CHMP4A
annotation not available
    
 0.952
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.