STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK1BUroplakin 1B. (260 aa)    
Predicted Functional Partners:
UPK3B
Uroplakin 3B.
   
  
 0.725
MET
Hepatocyte growth factor receptor.
    
 0.723
MST1R
Macrophage stimulating 1 receptor.
    
 0.723
UPK3A
Uroplakin 3A.
   
 
 0.715
UPK2
Uroplakin 2.
  
 
 
 0.695
CD19
CD19 molecule.
    
 0.618
UPK1A
Uroplakin 1A.
  
  
0.601
COL7A1
annotation not available
     
 0.550
TFAP2C
Transcription factor AP-2 gamma.
      
 0.528
PDGFB
Platelet derived growth factor subunit B.
    
 0.519
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.