STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D5TBC1 domain family member 5. (823 aa)    
Predicted Functional Partners:
VPS29
annotation not available
    
 
 0.964
ENSMICP00000047371
annotation not available
    
 
 0.964
VPS26B
VPS26, retromer complex component B.
   
 
 0.956
VPS35
VPS35 retromer complex component.
   
 
 0.948
ENSMICP00000013618
annotation not available
   
 
 0.835
ENSMICP00000024820
annotation not available
   
 
 0.835
ENSMICP00000027727
annotation not available
   
 
 0.835
ENSMICP00000029817
annotation not available
   
 
 0.835
ENSMICP00000050552
annotation not available
   
 
 0.835
RAB6A
RAB6A, member RAS oncogene family.
   
 
 0.751
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.