STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein. (307 aa)    
Predicted Functional Partners:
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.990
STX5
Syntaxin 5.
   
 0.990
GOSR2
annotation not available
    
 0.989
STX18
Syntaxin 18.
   
 0.983
YKT6
YKT6 v-SNARE homolog.
    
 0.983
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.979
SCFD1
Sec1 family domain containing 1.
   
 0.979
USE1
Unconventional SNARE in the ER 1.
    
 0.973
RINT1
RAD50 interactor 1.
    
 0.962
SEC24B
SEC24 homolog B, COPII coat complex component.
    
 0.957
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.