Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH10BUncharacterized protein. (875 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.847
WDR90
WD repeat domain 90.
    
 0.769
NME8
NME/NM23 family member 8.
    
 
 0.760
CCDC65
Coiled-coil domain containing 65.
    
 
 0.732
RSPH14
Radial spoke head 14 homolog.
    
 
 0.711
LRRC23
Leucine rich repeat containing 23.
    
 
 0.672
RSPH9
Radial spoke head 9 homolog.
   
 
 0.661
CFAP43
Cilia and flagella associated protein 43.
    
 
 0.625
CCDC113
Coiled-coil domain containing 113.
   
   0.623
ZMYND12
Zinc finger MYND-type containing 12.
    
   0.622
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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