Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAFD1TRAF-type zinc finger domain containing 1. (579 aa)    
Predicted Functional Partners:
NGLY1
N-glycanase 1.
    
   0.907
TRAF7
TNF receptor associated factor 7.
   
 0.842
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.784
GAK
Cyclin G associated kinase.
    
 0.681
TNFAIP6
TNF alpha induced protein 6.
    
 0.649
BBX
BBX high mobility group box domain containing.
    
 0.635
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.616
PSME1
Proteasome activator subunit 1.
   
 
 0.602
EEF1G
Eukaryotic translation elongation factor 1 gamma.
    
  0.599
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.599
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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