STARD3NL protein (Otolemur garnettii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

STARD3NL

STARD3 N-terminal like. (234 aa)

Predicted Functional Partners:

STARD3

0.902

VAPA

0.880

VAPB

0.854

STAR

0.850

MOSPD3

0.841

MOSPD1

0.832

STARD4

0.586

AMPH

0.538

FYCO1

0.536

OR10G3

0.534

Your Current Organism:

Otolemur garnettii

NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPH	STARD3NL	ENSOGAP00000000613	ENSOGAP00000001101	Amphiphysin.	STARD3 N-terminal like.	0.538
FYCO1	STARD3	ENSOGAP00000003398	ENSOGAP00000009441	FYVE and coiled-coil domain containing 1.	StAR related lipid transfer domain containing 3.	0.472
FYCO1	STARD3NL	ENSOGAP00000003398	ENSOGAP00000001101	FYVE and coiled-coil domain containing 1.	STARD3 N-terminal like.	0.536
FYCO1	VAPA	ENSOGAP00000003398	ENSOGAP00000020385	FYVE and coiled-coil domain containing 1.	VAMP associated protein A.	0.502
MOSPD1	STAR	ENSOGAP00000005131	ENSOGAP00000013574	Motile sperm domain containing 1.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.780
MOSPD1	STARD3	ENSOGAP00000005131	ENSOGAP00000009441	Motile sperm domain containing 1.	StAR related lipid transfer domain containing 3.	0.797
MOSPD1	STARD3NL	ENSOGAP00000005131	ENSOGAP00000001101	Motile sperm domain containing 1.	STARD3 N-terminal like.	0.832
MOSPD1	STARD4	ENSOGAP00000005131	ENSOGAP00000006794	Motile sperm domain containing 1.	StAR related lipid transfer domain containing 4.	0.780
MOSPD3	STAR	ENSOGAP00000021299	ENSOGAP00000013574	Motile sperm domain containing 3.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.780
MOSPD3	STARD3	ENSOGAP00000021299	ENSOGAP00000009441	Motile sperm domain containing 3.	StAR related lipid transfer domain containing 3.	0.815
MOSPD3	STARD3NL	ENSOGAP00000021299	ENSOGAP00000001101	Motile sperm domain containing 3.	STARD3 N-terminal like.	0.841
MOSPD3	STARD4	ENSOGAP00000021299	ENSOGAP00000006794	Motile sperm domain containing 3.	StAR related lipid transfer domain containing 4.	0.780
OR10G3	STARD3NL	ENSOGAP00000005564	ENSOGAP00000001101	Olfactory receptor family 10 subfamily G member 3.	STARD3 N-terminal like.	0.534
STAR	MOSPD1	ENSOGAP00000013574	ENSOGAP00000005131	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Motile sperm domain containing 1.	0.780
STAR	MOSPD3	ENSOGAP00000013574	ENSOGAP00000021299	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	Motile sperm domain containing 3.	0.780
STAR	STARD3	ENSOGAP00000013574	ENSOGAP00000009441	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	StAR related lipid transfer domain containing 3.	0.824
STAR	STARD3NL	ENSOGAP00000013574	ENSOGAP00000001101	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	STARD3 N-terminal like.	0.850
STAR	STARD4	ENSOGAP00000013574	ENSOGAP00000006794	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	StAR related lipid transfer domain containing 4.	0.690
STAR	VAPA	ENSOGAP00000013574	ENSOGAP00000020385	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	VAMP associated protein A.	0.786
STAR	VAPB	ENSOGAP00000013574	ENSOGAP00000014132	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	VAMP associated protein B and C.	0.783